SNP Profiles of CRIOLLO 21 [CRI]   View Data

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 Key

 1234567891011121314
_Input profile
CTCCACTTCTAGAACCAGCCGGGGAACG
1._RUQ_1682B
__AC_____AG_GG___
2._RUQ_1682
__AC_CTAGAAGGAG__GGAACG
3._RUQ_1682
AGCCACAAAGAGAAGGAGGGGGGGAACG
 1516171819202122232425262728
_Input profile
AACCTTGTCCAACTTTTTGTAGGTAACC
1._RUQ_1682B
_AC__CCAACT_TTGTAG_AACC
2._RUQ_1682
____CCAACT______GG
3._RUQ_1682
_CC_ACCCAAAGAA_ACAGACAAGG
 2930313233343536373839404142
_Input profile
CGCCGGGGCTGGAATTTTCTTTCCGGAG
1._RUQ_1682B
__AGGG____TT___GG_
2._RUQ_1682
CGCC__CT_AATT__TT_CC_
3._RUQ_1682
_GGAGGGAGCCAA_AAAGAAGGCCAG

Input profile: CRIOLLO_21_[CRI] RUQ_1682

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._CRIOLLO_21_[CRI] RUQ_1682B

93.8 %
16 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

2._CRIOLLO_21_[CRI] RUQ_1682

85 %
20 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

3._CRIOLLO_21_[CRI] RUQ_1682

47.3 %
37 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP448 15TcSNP469
16TcSNP529 17TcSNP534 18TcSNP560 19TcSNP577 20TcSNP591
21TcSNP602 22TcSNP619 23TcSNP702 24TcSNP723 25TcSNP731
26TcSNP799 27TcSNP823 28TcSNP872 29TcSNP878 30TcSNP891
31TcSNP899 32TcSNP998 33TcSNP1060 34TcSNP1063 35TcSNP1111
36TcSNP1126 37TcSNP1253 38TcSNP1309 39TcSNP1439 40TcSNP1442
41TcSNP1458 42TcSNP1484